Grape MPSS Libraries

All libraries were constructed using the grape cultivar Cabernet Sauvignon. Please click on the library name to open a new window that shows the information about the conditions under which the plants and RNA were obtained. 1 BR2 Berry - stage II, classic MPSS

Sensitivity of MPSS Analysis

Please select the Poisson confidence interval that you would like to test. This will calculate the level of expression at which you have the selected probability of identifying a gene in a N-sized bead population. The question that this answers is: given a Poisson confidence interval, what expression level is detectable(in TPM), for a defined sample size?

Poisson confidence interval: 90% 95% 99% 99.9%

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Choose a database: 17 bp 20 bp

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Now check the libraries to consider: (this will calculate the total # of signatures)

Select all libraries     Select none
Berry - stage II, classic MPSS library	(2,635,293 signatures)

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Or, enter a specific number of MPSS signatures:

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